Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834958.1_cds_XP_016505771.1_19072
CDS Infomation

[gene=LOC107823594] [db_xref=GeneID:107823594] [protein=double-stranded RNA-binding protein 1-like isoform X2] [protein_id=XP_016505771.1] [location=complement(join(6622..6992,7069..7251,7343..7495,7632..7851,8312..8562,9611..9709,12746..12956))] [gbkey=CDS]
Sequence

ATGTATAAGTCGAAGCTGCAAGAATTGTGTCAAAACAAGAAATGGGGACTTCCAAAATAC
TGGTGTATGAAAGATGGAGCAGAGCACAACCCACAATTCAAAGCTTCTGTGGTTGTGGAT
GGCATCAACTTTGACTCTCCAACTTTCTGCAAATCATCTAAAGAAGCCCACAATGAAGCT
GCTAAGTTTGCTTTCCTTCACTTTACTTTTGGTGGGTCACTTCCAACTATGGAAGATAGT
GGAGTAACAAAAATTGAGGAAGCATGTCAAAATCTGCGGGATCATCTAATTACTTCTGAG
ATCGAGCAAGAAGATTCTCACTATCAGTGCAAGAAGAAGCTGCAGATGTACACAAAAAGA
AAAAAACTTGGTGAACCTGTGTACCATAGTAAAAGGAAGAGCTCATCTCGTGATCTTCAT
AATGATCTTCACTTTGAGGCAACAGTGACTGTGGCTGGTGAATTGTTCAAAAGTCCTGGA
GCATACAAGACTGCAGAGGAAGCAGAAGATGCTGTTGCACAGCACGCATTGATGACACTA
GTAACAGTTGCTTTTCAAAAGAGTAATACCGGCAATTACAAGAGTTTCCTTCAAGAACTG
GCACAGCATGAAGGACTTTGCTTGCCTGAATATAAAACAATCAGGATTGGTGAGCCTCAC
AATCTAACATTCTTCTCAAGTGTAGAAGTTGAAGGAGAAGTGTTTCATGGGAATGCTTCA
AAGTCCAAGAAACAGGCAGAAGAAAATGCTGCCAAGGTTGCTTATATGGCGTTAGCAAAA
TGCAAATCCTTCCATGCTAGTGATCCTTTAACTGTGTCCTCGGACTTGGAAGGTGAAATT
TTCAAAACTGAGGCTTGCTTGGATTCACTGTCTATTTCTCATTCAGCTGCGACATCAACT
GTGAAAGATGTTCACCAGCCTGAAGAAAGCAAAAAAAAGACTCATCAGCTAGGTGACTCA
ACTATATCCTCGGAAACAAAGGATGAGAAGCTCAATCTTTCTCCTTGTGAAAGCTTGCTT
TCCGTTGCTAAAAAGCGAGGAAACCCCACGGTTGGATGTCCGCCAAATTCAACTTCAGTT
TTGATGAGTTTTGAGGTGGAGGATGAAGAAAAAGAAGATGAAGAGATGGTTCACTCTAAA
CATGCATCTGCACAGTCCATAGGTGCTGAAAAGTTTAATGCATCTTCATTTTTGCGGGGC
GTGCATGAGCTCAGTGTAAATGAAAATTCACCTTCTTCAATGGAATCAATGGTCCATTTG
CCTAAAGAAACTATATCATCAGCTGCAATGGCACCAACCCATTCCTCTACTGCGAATGCA
AATTCTAGCGCGAGAAAGACTGCAGAAACCAAAAGGTACCTCCTTTGTAACAGGGTCAGA
GTGTACAAATCCATTCCAGATGAGGTCCCCAAGGGTACTATTGTGCTTCCTATTGGTGAA
GATAAGTGGGTTGTTGTTAACTTGGAAATCCCCAATGAGAAAGTGTAG

Peptide Sequence

PEP ID

XP_016505771.1
PEP Infomation

PREDICTED: double-stranded RNA-binding protein 1-like isoform X2 [Nicotiana tabacum]
Sequence

MYKSKLQELCQNKKWGLPKYWCMKDGAEHNPQFKASVVVDGINFDSPTFCKSSKEAHNEA
AKFAFLHFTFGGSLPTMEDSGVTKIEEACQNLRDHLITSEIEQEDSHYQCKKKLQMYTKR
KKLGEPVYHSKRKSSSRDLHNDLHFEATVTVAGELFKSPGAYKTAEEAEDAVAQHALMTL
VTVAFQKSNTGNYKSFLQELAQHEGLCLPEYKTIRIGEPHNLTFFSSVEVEGEVFHGNAS
KSKKQAEENAAKVAYMALAKCKSFHASDPLTVSSDLEGEIFKTEACLDSLSISHSAATST
VKDVHQPEESKKKTHQLGDSTISSETKDEKLNLSPCESLLSVAKKRGNPTVGCPPNSTSV
LMSFEVEDEEKEDEEMVHSKHASAQSIGAEKFNASSFLRGVHELSVNENSPSSMESMVHL
PKETISSAAMAPTHSSTANANSSARKTAETKRYLLCNRVRVYKSIPDEVPKGTIVLPIGE
DKWVVVNLEIPNEKV

Transcript Sequence

Gene sequence data has not been registered.